Protein ZmHSF28
ZmHSF28 is a protein in the HSF family.
Information
TF Name: ZmHSF28
Species: Maize
TF Family: HSF
Gene Name(Synonym): HSFTF28
Uniprot ID: K0DG80
Subgenome: 1

Protein ZmHSF28

ZmHSF28 is a protein in the HSF family.

Overview of domains present in v5 transcripts
PF00447
Zm00001eb384760_T002

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d046299DAPseq no logo sequence fimo position
Zm00001d046299DAPseq no logo sequence fimo position
Zm00001d046299ChIPseq no logo sequence fimo position
Zm00001d046299PChIPseq no logo sequence fimo position

Interactions where ZmHSF28 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmHSF28 is the target  
Expand


There are 193 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb384760_T002 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MAAGGGGGSPAPFVWKTYTMVEDPGTAGVIGWGSGNNSFVVADPFVFSQTLLPAHFKHNNFSSFVRQLNTYGFRKVDPDR
WEFAHASFLRGQTHLLRNIVRRGSSAAGAGGGKRKDASPTELASGDDMTMVATEVVRLKQEQRAIDDRVASMWRRVQETE
RRPKQMLAFLLKVVGDRDRLHRLVGDAPVPDNGFASGGAAEPPAAEVGEKRARLLLDGDSMVALGPEAVDFAGFYSGGGA
FGDVAVDAAAGSRGGGFSFAFGVDAGY

MAAGGGGGSPAPFVWKTYTMVEDPGTAGVIGWGSGNNSFVVADPFVFSQTLLPAHFKHNNFSSFVRQLNTYGFRKVDPDR
WEFAHASFLRGQTHLLRNIVRRGSSAAGAGGGKRKDASPTELASGDDMTMVATEVVRLKQEQRAIDDRVASMWRRVQETE
RRPKQMLAFLLKVVGDRDRLHRLVGDAPVPDNGFASGGAAEPPAAEVGEKRARLLLDGDSMVALGPEAVDFAGFYSGGGA
FGDVAVDAAAGSRGGGFSFAFGVDAGY

MAAGGGGGSPAPFVWKTYTMVEDPGTAGVIGWGSGNNSFVVADPFVFSQTLLPAHFKHNNFSSFVRQLNTYGFRKVDPDR
WEFAHASFLRGQTHLLRNIVRRGSSAAGAGGGKRKDASPTELASGDDMTMVATEVVRLKQEQRAIDDRVASMWRRVQETE
RRPKQMLAFLLKVVGDRDRLHRLVGDAPVPDNGFASGGAAEPPAAEVGEKRARLLLDGDSMVALGPEAVDFAGFYSGGGA
FGDVAVDAAAGSRGGGFSFAFGVDAGY

MAAGGGGGSPAPFVWKTYTMVEDPGTAGVIGWGSGNNSFVVADPFVFSQTLLPAHFKHNNFSSFVRQLNTYGFRKVDPDR
WEFAHASFLRGQTHLLRNIVRRGSSAAGAGGGKRKDASPTELASGDDMTMVATEVVRLKQEQRAIDDRVASMWRRVQETE
RRPKQMLAFLLKVVGDRDRLHRLVGDAPVPDNGFASGGAAEPPAAEVGEKRARLLLDGDSMVALGPEAVDFAGFYSGGGA
FGDVAVDAAAGSRGGGFSFAFGVDAGY

MAAGGGGGSPAPFVWKTYTMVEDPGTAGVIGWGSGNNSFVVADPFVFSQTLLPAHFKHNNFSSFVRQLNTYGFRKVDPDR
WEFAHASFLRGQTHLLRNIVRRGSSAAGAGGGKRKDASPTELASGDDMTMVATEVVRLKQEQRAIDDRVASMWRRVQETE
RRPKQMLAFLLKVVGDRDRLHRLVGDAPVPDNGFASGGAAEPPAAEVGEKRARLLLDGDSMVALGPEAVDFAGFYSGGGA
FGDVAVDAAAGSRGGGFSFAFGVDAGY

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00447
Hover here to show all domains

Nucleotide Sequence
Copy to clipboard
     
Expand

CGTCGACACCCTGCCACCAACGACA...

GRMZM2G118047_T01 from maize genome v3


Related TFome: pUT3115

Amino Acid Sequence
Copy to clipboard

MAAGGGGGSPAPFVWKTYTMVEDPGTAGVIGWGSGNNSFVVADPFVFSQTLLPAHFKHNNFSSFVRQLNTYGFRKVDPDR
WEFAHASFLRGQTHLLRNIVRRGSSAAGAGGGKRKDASPTELASGDDMTMVATEVVRLKQEQRAIDDRVASMWRRVQETE
RRPKQMLAFLLKVVGDRDRLHRLVGDAPVPDNGFASGGAAEPPAAEVGEKRARLLLDGDSMVALGPEAVDFAGFYSGGGA
FGDVAVDAAAGSRGGGFSFAFGVDAGY

Nucleotide Sequence
Copy to clipboard
     
Expand

CCGTGGATTGGCGGGTCCGCGGCAG...

GRMZM2G118047_T02 from maize genome v3

Amino Acid Sequence
Copy to clipboard

MAAGGGGGSPAPFVWKTYTMVEDPGTAGVIGWGSGNNSFVVADPFVFSQTLLPAHFKHNNFSSFVRQLNTYVS

Nucleotide Sequence
Copy to clipboard
     
Expand

CCGTGGATTGGCGGGTCCGCGGCAG...

Zm00001d046299_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MAAGGGGGSPAPFVWKTYTMVEDPGTAGVIGWGSGNNSFVVADPFVFSQTLLPAHFKHNNFSSFVRQLNTYGFRKVDPDR
WEFAHASFLRGQTHLLRNIVRRGSSAAGAGGGKRKDASPTELASGDDMTMVATEVVRLKQEQRAIDDRVASMWRRVQETE
RRPKQMLAFLLKVVGDRDRLHRLVGDAPVPDNGFASGGAAEPPAAEVGEKRARLLLDGDSMVALGPEAVDFAGFYSGGGA
FGDVAVDAAAGSRGGGFSFAFGVDAGY

Nucleotide Sequence
Copy to clipboard
     
Expand

CACCAACGACAGGTTACCTTCTTCG...

Zm00001eb384750_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MLPCDGCRRSAQWHWQEARQQHKRAKLLTMAAPARHSVPRVHAERKREPASAGPSGSIHGNIAERTAAAVEPGEVDGLGT
ERHHAVTVEQQPGPLLADLRGGRLGGTAGGEPVIWHGGVADEAVQPVAVADDLEEEREHLLGPALRLLHAAPHGGDAVVD
GALLLLEAHHLRGHHGHVVPGGQLRGAGVLPLSASGTGGAAAAADDVAQEVRLAAQERRVGELPPVRINLAEALKIPSQG
KGSTSTSCAALGSRDL

Nucleotide Sequence
Copy to clipboard
     
Expand

AGAAAAGGGCTAAATAATAGCGATG...

Zm00001eb384760_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MSGFRKVDPDRWEFAHASFLRGQTHLLRNIVRRGSSAAGAGGGKRKDASPTELASGDDMTMVATEVVRLKQEQRAIDDRV
ASMWRRVQETERRPKQMLAFLLKVVGDRDRLHRLVGDAPVPDNGFASGGAAEPPAAEVGEKRARLLLDGDSMVALGPEAV
DFAGFYSGGGAFGDVAVDAAAGSRGGGFSFAFGVDAGY

Nucleotide Sequence
Copy to clipboard
     
Expand

CGTCGACACCCTGCCACCAACGACA...


Copyright © 2023 Grassius.org | Last updated: 2023-06-26